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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs67896886 chr7:64426807 G/C INTS4L1 chr7:64601603-64694600:+ 0.71 5.22 3.18E-6 Box Plot
ACC rs6795005 chr3:125908195 G/A ROPN1B chr3:125687987-125702297:+ 0.67 5.09 5.09E-6 Box Plot
ACC rs680507 chr1:245199236 C/G EFCAB2 chr1:245133007-245290466:+ 0.69 6.07 1.49E-7 Box Plot
ACC rs680826 chr1:245197101 G/A EFCAB2 chr1:245133007-245290466:+ 0.69 5.87 3.09E-7 Box Plot
ACC rs6811535 chr4:77198637 C/T NAAA chr4:76834810-76862204:- 0.52 5.25 2.82E-6 Box Plot
ACC rs6812193 chr4:77198986 C/T NAAA chr4:76834810-76862204:- 0.53 5.38 1.82E-6 Box Plot
ACC rs68172622 chr1:235322736 G/A RBM34 chr1:235294498-235324772:- 0.65 5.92 2.57E-7 Box Plot
ACC rs681773 chr20:44385102 A/G WFDC3 chr20:44376583-44420571:- 0.91 6.58 2.32E-8 Box Plot
ACC rs681793 chr1:245199000 T/C EFCAB2 chr1:245133007-245290466:+ 0.69 6.24 8.01E-8 Box Plot
ACC rs681809 chr1:245198989 T/C EFCAB2 chr1:245133007-245290466:+ 0.69 6.24 8.01E-8 Box Plot
ACC rs6826085 chr4:76870229 C/T NAAA chr4:76834810-76862204:- 0.52 5.3 2.4E-6 Box Plot
ACC rs683140 chr20:44384804 T/A WFDC3 chr20:44376583-44420571:- 0.91 6.58 2.32E-8 Box Plot
ACC rs683179 chr20:44384772 A/G WFDC3 chr20:44376583-44420571:- 0.91 6.58 2.32E-8 Box Plot
ACC rs6836137 chr4:145250822 A/C SMARCA5 chr4:144434616-144478639:+ 0.96 5.05 5.81E-6 Box Plot
ACC rs683829 chr9:98678164 G/T C9orf130 chr9:98568372-98638259:- 0.55 5.14 4.28E-6 Box Plot